BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A11LP1|AL425971
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1654 1626 0.0
>3x_Contig1654
Length = 17174
Score = 1626 bits (820), Expect = 0.0
Identities = 820/820 (100%)
Strand = Plus / Minus
Query: 1 agaggaactacttaaacagcaggttttaaccatgtcaaactatttagaataaatatcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3507 agaggaactacttaaacagcaggttttaaccatgtcaaactatttagaataaatatcacc 3448
Query: 61 taagtgaaataccaatgtatcaatgggttcgtatctctcatacatagaaaaataacttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3447 taagtgaaataccaatgtatcaatgggttcgtatctctcatacatagaaaaataacttca 3388
Query: 121 actcgttgtgtcaaggtcacgtcatcatatatacaagaaaagcagcaggttgaaaagtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3387 actcgttgtgtcaaggtcacgtcatcatatatacaagaaaagcagcaggttgaaaagtgc 3328
Query: 181 acattggcgcagagtctattgctttgttaaattcagaatttgttgaagagttgggcttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3327 acattggcgcagagtctattgctttgttaaattcagaatttgttgaagagttgggcttat 3268
Query: 241 tctttcttggtacggagttgcaaaccatgccatcttttaatatcgtcttttaaaatctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3267 tctttcttggtacggagttgcaaaccatgccatcttttaatatcgtcttttaaaatctca 3208
Query: 301 tttactagtttatgttgtttcactatcgacaatcctttgaacttatcacttgtaatatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3207 tttactagtttatgttgtttcactatcgacaatcctttgaacttatcacttgtaatatta 3148
Query: 361 atagaaaacatcgatccgcatcctccgctgatgtcattaacagagatggaagagggattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3147 atagaaaacatcgatccgcatcctccgctgatgtcattaacagagatggaagagggattc 3088
Query: 421 aactctttactcaacttatcagttatcagcttctcttctggagtcagagaatataaacgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3087 aactctttactcaacttatcagttatcagcttctcttctggagtcagagaatataaacgg 3028
Query: 481 cgccctagtgtagtcagtgttttacggaacattgttaactcggtactttgagctcagagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3027 cgccctagtgtagtcagtgttttacggaacattgttaactcggtactttgagctcagagt 2968
Query: 541 aatgatttcttgaggttgctgatttgctacatcgataacaccgattgatttgagagtctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2967 aatgatttcttgaggttgctgatttgctacatcgataacaccgattgatttgagagtctt 2908
Query: 601 caatttgatcaaatttcaggttgaaagaaatcttactaaagcttttcaggttggggaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2907 caatttgatcaaatttcaggttgaaagaaatcttactaaagcttttcaggttggggaaaa 2848
Query: 661 atgaaaataatacgtacatctcataaaatcagaatatccaagatacggtgattcaacatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2847 atgaaaataatacgtacatctcataaaatcagaatatccaagatacggtgattcaacatg 2788
Query: 721 taaacgacatatagaagcttgaattttgccctaggctgctaacagtatcgtcactaataa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2787 taaacgacatatagaagcttgaattttgccctaggctgctaacagtatcgtcactaataa 2728
Query: 781 acttgtcatttcaagaagcaattttgctggccaggaccga 820
||||||||||||||||||||||||||||||||||||||||
Sbjct: 2727 acttgtcatttcaagaagcaattttgctggccaggaccga 2688
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7183
Number of Sequences: 1807
Number of extensions: 7183
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)